Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Tpm1P58771 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.45□□□□□ -1.06
Tpm1P58771 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Tpm1P58771 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Tpm1P58771 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Tpm1P58771 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Tpm1P58771 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Gm8818-201ENSMUST00000110797 1047 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Gm12838-201ENSMUST00000116278 325 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Gm12024-201ENSMUST00000118819 1253 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Gm5389-201ENSMUST00000120893 1176 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Gm16585-201ENSMUST00000161442 610 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC8.44□□□□□ -1.06
Tpm1P58771 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC8.44□□□□□ -1.06
Tpm1P58771 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 AC160930.2-201ENSMUST00000226608 303 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Tpm1P58771 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Tpm1P58771 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Gm37090-201ENSMUST00000195694 4105 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Gm37206-201ENSMUST00000195512 3069 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC8.44□□□□□ -1.06
Tpm1P58771 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Tpm1P58771 Gm45832-201ENSMUST00000212762 1443 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.44□□□□□ -1.06
Tpm1P58771 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Tpm1P58771 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Tpm1P58771 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Tpm1P58771 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Tpm1P58771 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Mir744-201ENSMUST00000103261 100 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Gm25501-201ENSMUST00000104429 132 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Gm14826-201ENSMUST00000121284 901 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm22484-201ENSMUST00000157992 306 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm4868-201ENSMUST00000164138 789 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Gm10182-201ENSMUST00000178676 273 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm19175-201ENSMUST00000199895 916 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm32842-201ENSMUST00000212653 738 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Tpm1P58771 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Tpm1P58771 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Tpm1P58771 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Tpm1P58771 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC8.43□□□□□ -1.06
Tpm1P58771 AC122878.1-201ENSMUST00000227716 1460 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC8.43□□□□□ -1.06
Tpm1P58771 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Tpm1P58771 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.42□□□□□ -1.06
Tpm1P58771 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Tpm1P58771 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.42□□□□□ -1.06
Tpm1P58771 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms