Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Mgat4e-201ENSMUST00000052911 1360 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Gm5134-201ENSMUST00000099577 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Ceacam19-201ENSMUST00000052605 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 AC136986.2-201ENSMUST00000220880 2944 ntBASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Gm4907-201ENSMUST00000116614 1493 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Tnf-202ENSMUST00000167924 1462 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Numb-207ENSMUST00000129335 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Gm10513-201ENSMUST00000194203 6468 ntBASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Pcdhb7Q8CDY9 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Usp17lb-202ENSMUST00000106814 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Ralgps2-201ENSMUST00000027886 4237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm18640-201ENSMUST00000209777 2165 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm42811-201ENSMUST00000201951 2768 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gata4-203ENSMUST00000121312 2407 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 AC132474.1-201ENSMUST00000214407 3686 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Trmt2b-202ENSMUST00000087541 3119 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm43414-201ENSMUST00000197710 3188 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm12481-201ENSMUST00000102482 297 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Mageb7-ps-201ENSMUST00000118274 1041 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm13339-201ENSMUST00000120651 510 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 4931406B18Rik-202ENSMUST00000163474 726 ntTSL 5 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm27483-201ENSMUST00000184983 71 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 1700049E22Rik-201ENSMUST00000187986 507 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm40117-201ENSMUST00000198827 369 ntTSL 3 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Igkv9-119-201ENSMUST00000200307 353 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm43810-201ENSMUST00000201018 232 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm20072-201ENSMUST00000202231 292 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm18452-201ENSMUST00000202968 1111 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm44426-201ENSMUST00000204258 355 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm44928-201ENSMUST00000208098 128 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm17950-201ENSMUST00000214617 646 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm33700-201ENSMUST00000215123 697 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm19709-201ENSMUST00000215403 482 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr925-ps1-201ENSMUST00000217295 780 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 AC161117.2-201ENSMUST00000221908 451 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 CT033778.1-201ENSMUST00000224767 767 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 AC107711.5-201ENSMUST00000228149 594 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Olfr890-201ENSMUST00000079804 945 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 mt-Td-201ENSMUST00000082404 70 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Sat2-201ENSMUST00000092969 800 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Zmym1-203ENSMUST00000106102 3852 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm15495-201ENSMUST00000117570 1312 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Pikfyve-202ENSMUST00000097707 6641 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 G730013B05Rik-201ENSMUST00000180509 2176 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Zfp982-202ENSMUST00000105721 1488 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm44013-201ENSMUST00000204392 2262 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 AC133598.5-201ENSMUST00000224937 1517 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Opn1sw-201ENSMUST00000080428 2410 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 Gm37673-201ENSMUST00000194880 2451 ntBASIC8.69□□□□□ -1.02
Pcdhb7Q8CDY9 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 AC154681.1-201ENSMUST00000225876 1735 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Ctf2-201ENSMUST00000076091 1754 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Tes-201ENSMUST00000076654 2685 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm37114-201ENSMUST00000195065 1804 ntBASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Pcdhb7Q8CDY9 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms