Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Gm29369-201ENSMUST00000190674 615 ntBASIC8.25□□□□□ -1.09
NcanP55066 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.25□□□□□ -1.09
NcanP55066 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC8.25□□□□□ -1.09
NcanP55066 Gm45900-201ENSMUST00000211879 409 ntBASIC8.25□□□□□ -1.09
NcanP55066 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.25□□□□□ -1.09
NcanP55066 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 AC166574.7-201ENSMUST00000228502 704 ntBASIC8.25□□□□□ -1.09
NcanP55066 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
NcanP55066 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.25□□□□□ -1.09
NcanP55066 Col15a1-204ENSMUST00000107731 3253 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Gm5120-201ENSMUST00000215231 2414 ntBASIC8.25□□□□□ -1.09
NcanP55066 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 Sars-201ENSMUST00000090553 3570 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 Mrpl15-206ENSMUST00000156816 4203 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Gpr83-202ENSMUST00000115624 2937 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC8.25□□□□□ -1.09
NcanP55066 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 Gm40309-201ENSMUST00000202699 1752 ntBASIC8.25□□□□□ -1.09
NcanP55066 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
NcanP55066 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
NcanP55066 Gm42759-201ENSMUST00000195915 2439 ntBASIC8.24□□□□□ -1.09
NcanP55066 Gm9521-201ENSMUST00000206656 1516 ntBASIC8.24□□□□□ -1.09
NcanP55066 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.24□□□□□ -1.09
NcanP55066 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
NcanP55066 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC8.24□□□□□ -1.09
NcanP55066 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.24□□□□□ -1.09
NcanP55066 Gm11348-201ENSMUST00000118813 318 ntBASIC8.24□□□□□ -1.09
NcanP55066 Gm7494-201ENSMUST00000121248 441 ntBASIC8.24□□□□□ -1.09
NcanP55066 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.24□□□□□ -1.09
NcanP55066 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC8.24□□□□□ -1.09
NcanP55066 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC8.24□□□□□ -1.09
NcanP55066 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC8.24□□□□□ -1.09
NcanP55066 Gm4751-201ENSMUST00000200620 1105 ntBASIC8.24□□□□□ -1.09
NcanP55066 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC8.24□□□□□ -1.09
NcanP55066 Gm45734-201ENSMUST00000211916 411 ntBASIC8.24□□□□□ -1.09
NcanP55066 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Gm18972-201ENSMUST00000218873 630 ntBASIC8.24□□□□□ -1.09
NcanP55066 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
NcanP55066 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC8.24□□□□□ -1.09
NcanP55066 Gm29486-201ENSMUST00000088648 372 ntBASIC8.24□□□□□ -1.09
NcanP55066 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
NcanP55066 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.24□□□□□ -1.09
NcanP55066 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.24□□□□□ -1.09
NcanP55066 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
NcanP55066 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC8.24□□□□□ -1.09
NcanP55066 Pnma2-202ENSMUST00000122431 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Dhx30-215ENSMUST00000198425 3968 ntTSL 5 BASIC8.24□□□□□ -1.09
NcanP55066 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC8.24□□□□□ -1.09
NcanP55066 Nol4-202ENSMUST00000081423 3309 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
NcanP55066 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
NcanP55066 Gm36401-201ENSMUST00000194255 2028 ntBASIC8.24□□□□□ -1.09
NcanP55066 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
NcanP55066 Gm37549-201ENSMUST00000194096 4065 ntBASIC8.24□□□□□ -1.09
NcanP55066 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Hecw2-201ENSMUST00000087659 11171 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
NcanP55066 Nek11-201ENSMUST00000038648 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Gm16433-201ENSMUST00000062429 1984 ntBASIC8.23□□□□□ -1.09
NcanP55066 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
NcanP55066 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
NcanP55066 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.23□□□□□ -1.09
NcanP55066 Gm13243-201ENSMUST00000117481 565 ntBASIC8.23□□□□□ -1.09
NcanP55066 Gm13489-201ENSMUST00000121234 971 ntBASIC8.23□□□□□ -1.09
NcanP55066 Gm14200-201ENSMUST00000122256 192 ntBASIC8.23□□□□□ -1.09
NcanP55066 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.23□□□□□ -1.09
NcanP55066 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC8.23□□□□□ -1.09
NcanP55066 Gm3076-201ENSMUST00000161613 451 ntBASIC8.23□□□□□ -1.09
NcanP55066 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
NcanP55066 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
NcanP55066 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms