Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Col1a1P11087 Gm15913-201ENSMUST00000118492 331 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Gm12804-201ENSMUST00000121030 999 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.97□□□□□ -0.97
Col1a1P11087 Mir8105-201ENSMUST00000184718 89 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.97□□□□□ -0.97
Col1a1P11087 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC8.97□□□□□ -0.97
Col1a1P11087 Gm37017-201ENSMUST00000195266 747 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.97□□□□□ -0.97
Col1a1P11087 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC8.97□□□□□ -0.97
Col1a1P11087 Gm44856-201ENSMUST00000206639 304 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.97□□□□□ -0.97
Col1a1P11087 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.97□□□□□ -0.97
Col1a1P11087 AC154515.3-201ENSMUST00000225081 1159 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 AC110176.1-201ENSMUST00000226219 504 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 AC124103.1-201ENSMUST00000227564 1027 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Col1a1P11087 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Col1a1P11087 Gm42811-201ENSMUST00000201951 2768 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Col1a1P11087 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Col1a1P11087 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Col1a1P11087 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.97□□□□□ -0.97
Col1a1P11087 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Col1a1P11087 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC8.97□□□□□ -0.97
Col1a1P11087 Unc13d-202ENSMUST00000106450 4046 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Col1a1P11087 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.97
Col1a1P11087 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col1a1P11087 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col1a1P11087 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col1a1P11087 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC8.96□□□□□ -0.97
Col1a1P11087 Gm17170-201ENSMUST00000112785 316 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 Gm15484-201ENSMUST00000118871 828 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 Gm11474-201ENSMUST00000120814 277 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 Gm14990-201ENSMUST00000122354 445 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 Mir1900-201ENSMUST00000122714 78 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 Gm12158-201ENSMUST00000130493 631 ntTSL 3 BASIC8.96□□□□□ -0.97
Col1a1P11087 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col1a1P11087 Gm19480-201ENSMUST00000185547 667 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col1a1P11087 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC8.96□□□□□ -0.97
Col1a1P11087 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.96□□□□□ -0.97
Col1a1P11087 Gm8896-201ENSMUST00000197434 1106 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC8.96□□□□□ -0.97
Col1a1P11087 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col1a1P11087 AC151901.1-201ENSMUST00000218274 180 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC8.96□□□□□ -0.97
Col1a1P11087 AC154532.1-201ENSMUST00000227860 965 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC8.96□□□□□ -0.97
Col1a1P11087 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col1a1P11087 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col1a1P11087 Gm12183-201ENSMUST00000120566 1848 ntBASIC8.96□□□□□ -0.97
Col1a1P11087 Scn8a-213ENSMUST00000201549 7120 ntAPPRIS P5 TSL 5 BASIC8.96□□□□□ -0.97
Col1a1P11087 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Col1a1P11087 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Col1a1P11087 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Col1a1P11087 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Stag3-201ENSMUST00000048028 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
Col1a1P11087 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Tcaim-201ENSMUST00000052740 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Col1a1P11087 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Col1a1P11087 Gm11338-201ENSMUST00000120086 1160 ntBASIC8.96□□□□□ -0.98
Col1a1P11087 Gm12903-201ENSMUST00000121015 544 ntBASIC8.96□□□□□ -0.98
Col1a1P11087 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Gm24057-201ENSMUST00000158616 302 ntBASIC8.96□□□□□ -0.98
Col1a1P11087 Gm25640-201ENSMUST00000175378 125 ntBASIC8.96□□□□□ -0.98
Col1a1P11087 Mir7084-201ENSMUST00000183876 70 ntBASIC8.96□□□□□ -0.98
Col1a1P11087 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.96□□□□□ -0.98
Col1a1P11087 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC8.96□□□□□ -0.98
Col1a1P11087 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col1a1P11087 Gm34583-203ENSMUST00000202586 454 ntBASIC8.96□□□□□ -0.98
Col1a1P11087 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms