Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn6Q9Z262 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn6Q9Z262 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.45■□□□□ 0.38
Cldn6Q9Z262 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cldn6Q9Z262 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.45■□□□□ 0.38
Cldn6Q9Z262 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn6Q9Z262 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cldn6Q9Z262 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.45■□□□□ 0.38
Cldn6Q9Z262 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.44■□□□□ 0.38
Cldn6Q9Z262 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn6Q9Z262 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn6Q9Z262 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn6Q9Z262 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.42■□□□□ 0.38
Cldn6Q9Z262 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn6Q9Z262 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn6Q9Z262 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.42■□□□□ 0.38
Cldn6Q9Z262 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn6Q9Z262 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.42■□□□□ 0.38
Cldn6Q9Z262 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn6Q9Z262 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn6Q9Z262 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.42■□□□□ 0.38
Cldn6Q9Z262 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn6Q9Z262 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn6Q9Z262 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn6Q9Z262 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn6Q9Z262 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cldn6Q9Z262 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Gm5874-201ENSMUST00000096101 508 ntBASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn6Q9Z262 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn6Q9Z262 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms