Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nr1h3Q9Z0Y9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1h3Q9Z0Y9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1h3Q9Z0Y9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nr1h3Q9Z0Y9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.17■□□□□ 0.82
Nr1h3Q9Z0Y9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h3Q9Z0Y9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h3Q9Z0Y9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h3Q9Z0Y9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h3Q9Z0Y9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h3Q9Z0Y9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nr1h3Q9Z0Y9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nr1h3Q9Z0Y9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nr1h3Q9Z0Y9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Nr1h3Q9Z0Y9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.14■□□□□ 0.81
Nr1h3Q9Z0Y9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.14■□□□□ 0.81
Nr1h3Q9Z0Y9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Nr1h3Q9Z0Y9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nr1h3Q9Z0Y9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm5643-201ENSMUST00000117081 966 ntBASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nr1h3Q9Z0Y9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nr1h3Q9Z0Y9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Dio3-201ENSMUST00000097228 1449 ntBASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm44549-201ENSMUST00000208351 577 ntBASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.11■□□□□ 0.81
Nr1h3Q9Z0Y9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1h3Q9Z0Y9 Mir7071-201ENSMUST00000184847 69 ntBASIC20.1■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.1■□□□□ 0.81
Nr1h3Q9Z0Y9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1h3Q9Z0Y9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1h3Q9Z0Y9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1h3Q9Z0Y9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Nr1h3Q9Z0Y9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1h3Q9Z0Y9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1h3Q9Z0Y9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nr1h3Q9Z0Y9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nr1h3Q9Z0Y9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nr1h3Q9Z0Y9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nr1h3Q9Z0Y9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nr1h3Q9Z0Y9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.08■□□□□ 0.81
Nr1h3Q9Z0Y9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nr1h3Q9Z0Y9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nr1h3Q9Z0Y9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nr1h3Q9Z0Y9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.08■□□□□ 0.81
Nr1h3Q9Z0Y9 Mir6982-201ENSMUST00000184354 68 ntBASIC20.08■□□□□ 0.81
Nr1h3Q9Z0Y9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nr1h3Q9Z0Y9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms