Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn13Q9Z0S4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn13Q9Z0S4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cldn13Q9Z0S4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn13Q9Z0S4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cldn13Q9Z0S4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn13Q9Z0S4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.56■□□□□ 0.24
Cldn13Q9Z0S4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn13Q9Z0S4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn13Q9Z0S4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cldn13Q9Z0S4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cldn13Q9Z0S4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn13Q9Z0S4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Gm13146-201ENSMUST00000118508 780 ntBASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Gm7860-201ENSMUST00000121190 879 ntBASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Gm37179-201ENSMUST00000194862 823 ntBASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn13Q9Z0S4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn13Q9Z0S4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.52■□□□□ 0.24
Cldn13Q9Z0S4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn13Q9Z0S4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn13Q9Z0S4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn13Q9Z0S4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn13Q9Z0S4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn13Q9Z0S4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn13Q9Z0S4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn13Q9Z0S4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn13Q9Z0S4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Cldn13Q9Z0S4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn13Q9Z0S4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn13Q9Z0S4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn13Q9Z0S4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn13Q9Z0S4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Gm7514-201ENSMUST00000209475 934 ntBASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn13Q9Z0S4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn13Q9Z0S4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cldn13Q9Z0S4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn13Q9Z0S4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn13Q9Z0S4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn13Q9Z0S4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn13Q9Z0S4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn13Q9Z0S4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.5■□□□□ 0.23
Cldn13Q9Z0S4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn13Q9Z0S4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms