Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn3Q9Z0G9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn3Q9Z0G9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.81■□□□□ 0.6
Cldn3Q9Z0G9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 BC021767-201ENSMUST00000126387 1716 ntBASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn3Q9Z0G9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn3Q9Z0G9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn3Q9Z0G9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cldn3Q9Z0G9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cldn3Q9Z0G9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Cldn3Q9Z0G9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cldn3Q9Z0G9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.77■□□□□ 0.59
Cldn3Q9Z0G9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn3Q9Z0G9 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.75■□□□□ 0.59
Cldn3Q9Z0G9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn3Q9Z0G9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn3Q9Z0G9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cldn3Q9Z0G9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.75■□□□□ 0.59
Cldn3Q9Z0G9 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.75■□□□□ 0.59
Cldn3Q9Z0G9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn3Q9Z0G9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn3Q9Z0G9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn3Q9Z0G9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn3Q9Z0G9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn3Q9Z0G9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms