Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.74■□□□□ 0.43
Lhx9Q9WUH2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx9Q9WUH2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Lhx9Q9WUH2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.74■□□□□ 0.43
Lhx9Q9WUH2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lhx9Q9WUH2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lhx9Q9WUH2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx9Q9WUH2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx9Q9WUH2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx9Q9WUH2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx9Q9WUH2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx9Q9WUH2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Gm20049-201ENSMUST00000219950 730 ntBASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx9Q9WUH2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Gm22240-201ENSMUST00000175225 82 ntBASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Gm8520-201ENSMUST00000186517 868 ntBASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lhx9Q9WUH2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms