Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ClcnkaQ9WUB7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ClcnkaQ9WUB7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ClcnkaQ9WUB7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ClcnkaQ9WUB7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ClcnkaQ9WUB7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Gm13146-201ENSMUST00000118508 780 ntBASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Gm42642-201ENSMUST00000200683 355 ntBASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.06■□□□□ 0.32
ClcnkaQ9WUB7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ClcnkaQ9WUB7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Gm18671-201ENSMUST00000214826 683 ntBASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ClcnkaQ9WUB7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ClcnkaQ9WUB7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ClcnkaQ9WUB7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClcnkaQ9WUB7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.02■□□□□ 0.32
ClcnkaQ9WUB7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.02■□□□□ 0.32
ClcnkaQ9WUB7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ClcnkaQ9WUB7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms