Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn8aQ9WTU3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scn8aQ9WTU3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.83■□□□□ 0.6
Scn8aQ9WTU3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.83■□□□□ 0.6
Scn8aQ9WTU3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Scn8aQ9WTU3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn8aQ9WTU3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn8aQ9WTU3 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 BC021767-201ENSMUST00000126387 1716 ntBASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Gm20760-201ENSMUST00000179197 648 ntBASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Gm2559-201ENSMUST00000201323 363 ntBASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn8aQ9WTU3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn8aQ9WTU3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scn8aQ9WTU3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 Gm12896-201ENSMUST00000118430 226 ntBASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.79■□□□□ 0.6
Scn8aQ9WTU3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn8aQ9WTU3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn8aQ9WTU3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn8aQ9WTU3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Scn8aQ9WTU3 Gm13168-201ENSMUST00000121771 632 ntBASIC18.77■□□□□ 0.6
Scn8aQ9WTU3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.77■□□□□ 0.6
Scn8aQ9WTU3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn8aQ9WTU3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn8aQ9WTU3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.77■□□□□ 0.6
Scn8aQ9WTU3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn8aQ9WTU3 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.77■□□□□ 0.6
Scn8aQ9WTU3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Scn8aQ9WTU3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn8aQ9WTU3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn8aQ9WTU3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn8aQ9WTU3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn8aQ9WTU3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Gm11927-201ENSMUST00000118472 759 ntBASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.75■□□□□ 0.59
Scn8aQ9WTU3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms