Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube4bQ9ES00 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ube4bQ9ES00 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.84■□□□□ 0.45
Ube4bQ9ES00 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ube4bQ9ES00 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube4bQ9ES00 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Ube4bQ9ES00 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.83■□□□□ 0.45
Ube4bQ9ES00 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube4bQ9ES00 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube4bQ9ES00 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ube4bQ9ES00 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Gm7143-201ENSMUST00000222811 859 ntBASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ube4bQ9ES00 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ube4bQ9ES00 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ube4bQ9ES00 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ube4bQ9ES00 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms