Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vps28Q9D1C8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps28Q9D1C8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps28Q9D1C8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vps28Q9D1C8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Golph3-205ENSMUST00000228671 2842 ntBASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vps28Q9D1C8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vps28Q9D1C8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Vps28Q9D1C8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps28Q9D1C8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps28Q9D1C8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps28Q9D1C8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Vps28Q9D1C8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vps28Q9D1C8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps28Q9D1C8 Dapk1-207ENSMUST00000226059 5009 ntBASIC19■□□□□ 0.63
Vps28Q9D1C8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps28Q9D1C8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vps28Q9D1C8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Gm6211-202ENSMUST00000167849 925 ntBASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vps28Q9D1C8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Gm13148-201ENSMUST00000118892 745 ntBASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Vps28Q9D1C8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vps28Q9D1C8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vps28Q9D1C8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vps28Q9D1C8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Vps28Q9D1C8 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.96■□□□□ 0.63
Vps28Q9D1C8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.96■□□□□ 0.63
Vps28Q9D1C8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms