Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smurf1Q9CUN6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smurf1Q9CUN6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smurf1Q9CUN6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smurf1Q9CUN6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smurf1Q9CUN6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smurf1Q9CUN6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smurf1Q9CUN6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smurf1Q9CUN6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smurf1Q9CUN6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.89■□□□□ 0.29
Smurf1Q9CUN6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.89■□□□□ 0.29
Smurf1Q9CUN6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.89■□□□□ 0.29
Smurf1Q9CUN6 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.89■□□□□ 0.29
Smurf1Q9CUN6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smurf1Q9CUN6 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.89■□□□□ 0.29
Smurf1Q9CUN6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smurf1Q9CUN6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Fst-202ENSMUST00000223640 2612 ntBASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smurf1Q9CUN6 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smurf1Q9CUN6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Gm9847-201ENSMUST00000052528 599 ntBASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Gm13241-201ENSMUST00000094493 780 ntBASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smurf1Q9CUN6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smurf1Q9CUN6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms