Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc43Q9CR29 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.9
Ccdc43Q9CR29 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Gm7860-201ENSMUST00000121190 879 ntBASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc43Q9CR29 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc43Q9CR29 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.62■□□□□ 0.89
Ccdc43Q9CR29 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc43Q9CR29 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 BC021767-201ENSMUST00000126387 1716 ntBASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc43Q9CR29 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc43Q9CR29 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc43Q9CR29 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc43Q9CR29 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc43Q9CR29 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc43Q9CR29 Gm9988-201ENSMUST00000069786 435 ntBASIC20.59■□□□□ 0.89
Ccdc43Q9CR29 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc43Q9CR29 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ccdc43Q9CR29 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms