Protein–RNA interactions for Protein: Q9CR09

Ufc1, Ubiquitin-fold modifier-conjugating enzyme 1, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufc1Q9CR09 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ufc1Q9CR09 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.64□□□□□ -0.07
Ufc1Q9CR09 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ufc1Q9CR09 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ufc1Q9CR09 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ufc1Q9CR09 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ufc1Q9CR09 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.59□□□□□ -0.07
Ufc1Q9CR09 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms