Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39lQ9CQD0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39lQ9CQD0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39lQ9CQD0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39lQ9CQD0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39lQ9CQD0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rpl39lQ9CQD0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rpl39lQ9CQD0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rpl39lQ9CQD0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Fst-202ENSMUST00000223640 2612 ntBASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl39lQ9CQD0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpl39lQ9CQD0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpl39lQ9CQD0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Rpl39lQ9CQD0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl39lQ9CQD0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rpl39lQ9CQD0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms