Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim33Q99PP7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim33Q99PP7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim33Q99PP7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim33Q99PP7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim33Q99PP7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim33Q99PP7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim33Q99PP7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim33Q99PP7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Gm13534-201ENSMUST00000121169 513 ntBASIC18.35■□□□□ 0.53
Trim33Q99PP7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim33Q99PP7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.34■□□□□ 0.53
Trim33Q99PP7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim33Q99PP7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
Trim33Q99PP7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim33Q99PP7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim33Q99PP7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim33Q99PP7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim33Q99PP7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim33Q99PP7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim33Q99PP7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim33Q99PP7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim33Q99PP7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim33Q99PP7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trim33Q99PP7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.33■□□□□ 0.52
Trim33Q99PP7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim33Q99PP7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Gm7514-201ENSMUST00000209475 934 ntBASIC18.32■□□□□ 0.52
Trim33Q99PP7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim33Q99PP7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim33Q99PP7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim33Q99PP7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim33Q99PP7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim33Q99PP7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim33Q99PP7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim33Q99PP7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim33Q99PP7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim33Q99PP7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim33Q99PP7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim33Q99PP7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim33Q99PP7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim33Q99PP7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms