Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Raf1Q99N57 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raf1Q99N57 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Raf1Q99N57 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raf1Q99N57 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raf1Q99N57 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raf1Q99N57 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raf1Q99N57 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Raf1Q99N57 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Raf1Q99N57 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raf1Q99N57 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.64■□□□□ 0.25
Raf1Q99N57 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.64■□□□□ 0.25
Raf1Q99N57 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raf1Q99N57 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Raf1Q99N57 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Raf1Q99N57 Gm26833-201ENSMUST00000180899 440 ntBASIC16.64■□□□□ 0.25
Raf1Q99N57 Gm42569-201ENSMUST00000200539 472 ntBASIC16.64■□□□□ 0.25
Raf1Q99N57 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Raf1Q99N57 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raf1Q99N57 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raf1Q99N57 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raf1Q99N57 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raf1Q99N57 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.63■□□□□ 0.25
Raf1Q99N57 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raf1Q99N57 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raf1Q99N57 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raf1Q99N57 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Raf1Q99N57 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.63■□□□□ 0.25
Raf1Q99N57 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Raf1Q99N57 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.63■□□□□ 0.25
Raf1Q99N57 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Raf1Q99N57 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Raf1Q99N57 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raf1Q99N57 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raf1Q99N57 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raf1Q99N57 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raf1Q99N57 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raf1Q99N57 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Raf1Q99N57 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raf1Q99N57 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raf1Q99N57 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Raf1Q99N57 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
Raf1Q99N57 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.62■□□□□ 0.25
Raf1Q99N57 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raf1Q99N57 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
Raf1Q99N57 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raf1Q99N57 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Raf1Q99N57 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raf1Q99N57 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raf1Q99N57 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raf1Q99N57 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.61■□□□□ 0.25
Raf1Q99N57 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Raf1Q99N57 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raf1Q99N57 Gm12251-201ENSMUST00000117893 792 ntBASIC16.61■□□□□ 0.25
Raf1Q99N57 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Raf1Q99N57 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Raf1Q99N57 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.61■□□□□ 0.25
Raf1Q99N57 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Raf1Q99N57 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Raf1Q99N57 Gm10493-201ENSMUST00000097270 612 ntBASIC16.61■□□□□ 0.25
Raf1Q99N57 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Raf1Q99N57 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Raf1Q99N57 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raf1Q99N57 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.61■□□□□ 0.25
Raf1Q99N57 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raf1Q99N57 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Raf1Q99N57 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
Raf1Q99N57 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Gm43060-201ENSMUST00000200621 289 ntBASIC16.6■□□□□ 0.25
Raf1Q99N57 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.6■□□□□ 0.25
Raf1Q99N57 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Raf1Q99N57 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Raf1Q99N57 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Raf1Q99N57 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.6■□□□□ 0.25
Raf1Q99N57 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Raf1Q99N57 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Raf1Q99N57 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Raf1Q99N57 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Raf1Q99N57 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.59■□□□□ 0.25
Raf1Q99N57 Gm27405-201ENSMUST00000184201 112 ntBASIC16.59■□□□□ 0.25
Raf1Q99N57 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Raf1Q99N57 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Raf1Q99N57 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Raf1Q99N57 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Raf1Q99N57 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.58■□□□□ 0.25
Raf1Q99N57 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Raf1Q99N57 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Raf1Q99N57 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Raf1Q99N57 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Raf1Q99N57 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms