Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Gm7290-201ENSMUST00000104990 617 ntBASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Gm12918-201ENSMUST00000120234 636 ntBASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Gm15710-201ENSMUST00000121821 636 ntBASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Gm5075-201ENSMUST00000196916 622 ntBASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha9Q91Y11 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha9Q91Y11 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha9Q91Y11 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdha9Q91Y11 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha9Q91Y11 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.8■□□□□ 0.76
Pcdha9Q91Y11 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha9Q91Y11 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha9Q91Y11 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdha9Q91Y11 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha9Q91Y11 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha9Q91Y11 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.78■□□□□ 0.76
Pcdha9Q91Y11 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdha9Q91Y11 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha9Q91Y11 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha9Q91Y11 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha9Q91Y11 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha9Q91Y11 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha9Q91Y11 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Pcdha9Q91Y11 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdha9Q91Y11 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha9Q91Y11 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdha9Q91Y11 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha9Q91Y11 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha9Q91Y11 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms