Protein–RNA interactions for Protein: Q91Y03

Pcdhb16, MCG141291, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb16Q91Y03 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhb16Q91Y03 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhb16Q91Y03 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb16Q91Y03 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb16Q91Y03 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Gm13146-201ENSMUST00000118508 780 ntBASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb16Q91Y03 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb16Q91Y03 Gm10033-202ENSMUST00000211874 928 ntBASIC17.63■□□□□ 0.41
Pcdhb16Q91Y03 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb16Q91Y03 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb16Q91Y03 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 AV356131-201ENSMUST00000206201 750 ntBASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb16Q91Y03 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb16Q91Y03 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms