Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb22Q91XZ8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb22Q91XZ8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdhb22Q91XZ8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb22Q91XZ8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Pcdhb22Q91XZ8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.75■■□□□ 1.07
Pcdhb22Q91XZ8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pcdhb22Q91XZ8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Pcdhb22Q91XZ8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb22Q91XZ8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb22Q91XZ8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb22Q91XZ8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhb22Q91XZ8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb22Q91XZ8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb22Q91XZ8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Gm12933-201ENSMUST00000120203 872 ntBASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb22Q91XZ8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb22Q91XZ8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb22Q91XZ8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms