Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rpa1Q8VEE4 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rpa1Q8VEE4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Gm14117-201ENSMUST00000122417 843 ntBASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rpa1Q8VEE4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rpa1Q8VEE4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa1Q8VEE4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa1Q8VEE4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpa1Q8VEE4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpa1Q8VEE4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpa1Q8VEE4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa1Q8VEE4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms