Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndc1Q8VCB1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ndc1Q8VCB1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ndc1Q8VCB1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ndc1Q8VCB1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ndc1Q8VCB1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ndc1Q8VCB1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ndc1Q8VCB1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndc1Q8VCB1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Ndc1Q8VCB1 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.51■□□□□ 0.39
Ndc1Q8VCB1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.51■□□□□ 0.39
Ndc1Q8VCB1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.51■□□□□ 0.39
Ndc1Q8VCB1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Ndc1Q8VCB1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Ndc1Q8VCB1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ndc1Q8VCB1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndc1Q8VCB1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndc1Q8VCB1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndc1Q8VCB1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ndc1Q8VCB1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndc1Q8VCB1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.5■□□□□ 0.39
Ndc1Q8VCB1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ndc1Q8VCB1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndc1Q8VCB1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndc1Q8VCB1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndc1Q8VCB1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndc1Q8VCB1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Gm12527-201ENSMUST00000117967 564 ntBASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndc1Q8VCB1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndc1Q8VCB1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ndc1Q8VCB1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ndc1Q8VCB1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndc1Q8VCB1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ndc1Q8VCB1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ndc1Q8VCB1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndc1Q8VCB1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndc1Q8VCB1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.47■□□□□ 0.39
Ndc1Q8VCB1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndc1Q8VCB1 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.46■□□□□ 0.38
Ndc1Q8VCB1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms