Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf8Q8VC56 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf8Q8VC56 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rnf8Q8VC56 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Gm18284-201ENSMUST00000172604 624 ntBASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf8Q8VC56 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Gm8495-201ENSMUST00000188740 694 ntBASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf8Q8VC56 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Gm27801-201ENSMUST00000184174 223 ntBASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf8Q8VC56 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf8Q8VC56 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms