Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sh3kbp1Q8R550 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3kbp1Q8R550 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.12■□□□□ 0.65
Sh3kbp1Q8R550 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.12■□□□□ 0.65
Sh3kbp1Q8R550 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Sh3kbp1Q8R550 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3kbp1Q8R550 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sh3kbp1Q8R550 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Gm5408-201ENSMUST00000197998 747 ntBASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sh3kbp1Q8R550 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
Sh3kbp1Q8R550 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.09■□□□□ 0.65
Sh3kbp1Q8R550 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Sh3kbp1Q8R550 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3kbp1Q8R550 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3kbp1Q8R550 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3kbp1Q8R550 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
Sh3kbp1Q8R550 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3kbp1Q8R550 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Sh3kbp1Q8R550 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Sh3kbp1Q8R550 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3kbp1Q8R550 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3kbp1Q8R550 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3kbp1Q8R550 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3kbp1Q8R550 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Sh3kbp1Q8R550 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3kbp1Q8R550 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3kbp1Q8R550 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3kbp1Q8R550 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Gm6211-202ENSMUST00000167849 925 ntBASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.07■□□□□ 0.64
Sh3kbp1Q8R550 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.06■□□□□ 0.64
Sh3kbp1Q8R550 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms