Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Gtf3c5Q8R2T8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gtf3c5Q8R2T8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gtf3c5Q8R2T8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.69■■□□□ 1.06
Gtf3c5Q8R2T8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gtf3c5Q8R2T8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gtf3c5Q8R2T8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gtf3c5Q8R2T8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.69■■□□□ 1.06
Gtf3c5Q8R2T8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Gtf3c5Q8R2T8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Gtf3c5Q8R2T8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Gtf3c5Q8R2T8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 Gm37179-201ENSMUST00000194862 823 ntBASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Gtf3c5Q8R2T8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Gtf3c5Q8R2T8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.65■■□□□ 1.06
Gtf3c5Q8R2T8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gtf3c5Q8R2T8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Gtf3c5Q8R2T8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Gm6420-201ENSMUST00000193885 723 ntBASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.63■■□□□ 1.05
Gtf3c5Q8R2T8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms