Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn1Q8K445 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clrn1Q8K445 BC021767-201ENSMUST00000126387 1716 ntBASIC17.55■□□□□ 0.4
Clrn1Q8K445 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.55■□□□□ 0.4
Clrn1Q8K445 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Clrn1Q8K445 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Gm13534-201ENSMUST00000121169 513 ntBASIC17.54■□□□□ 0.4
Clrn1Q8K445 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn1Q8K445 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.53■□□□□ 0.4
Clrn1Q8K445 AV356131-201ENSMUST00000206201 750 ntBASIC17.53■□□□□ 0.4
Clrn1Q8K445 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.53■□□□□ 0.4
Clrn1Q8K445 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Gm7514-201ENSMUST00000209475 934 ntBASIC17.52■□□□□ 0.4
Clrn1Q8K445 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn1Q8K445 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn1Q8K445 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.51■□□□□ 0.39
Clrn1Q8K445 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms