Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cchcr1Q8K2I2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cchcr1Q8K2I2 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.98■■□□□ 1.11
Cchcr1Q8K2I2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cchcr1Q8K2I2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cchcr1Q8K2I2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Cchcr1Q8K2I2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.96■■□□□ 1.11
Cchcr1Q8K2I2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.96■■□□□ 1.11
Cchcr1Q8K2I2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.96■■□□□ 1.11
Cchcr1Q8K2I2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cchcr1Q8K2I2 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.96■■□□□ 1.11
Cchcr1Q8K2I2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cchcr1Q8K2I2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cchcr1Q8K2I2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cchcr1Q8K2I2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Cchcr1Q8K2I2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cchcr1Q8K2I2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Cchcr1Q8K2I2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Cchcr1Q8K2I2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.95■■□□□ 1.1
Cchcr1Q8K2I2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cchcr1Q8K2I2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cchcr1Q8K2I2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cchcr1Q8K2I2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.95■■□□□ 1.1
Cchcr1Q8K2I2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cchcr1Q8K2I2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cchcr1Q8K2I2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms