Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Trim68Q8K243 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim68Q8K243 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim68Q8K243 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim68Q8K243 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim68Q8K243 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim68Q8K243 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim68Q8K243 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim68Q8K243 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim68Q8K243 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Trim68Q8K243 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim68Q8K243 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim68Q8K243 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim68Q8K243 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim68Q8K243 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim68Q8K243 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim68Q8K243 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim68Q8K243 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim68Q8K243 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim68Q8K243 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim68Q8K243 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim68Q8K243 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim68Q8K243 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Trim68Q8K243 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim68Q8K243 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim68Q8K243 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim68Q8K243 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim68Q8K243 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trim68Q8K243 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim68Q8K243 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim68Q8K243 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim68Q8K243 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim68Q8K243 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim68Q8K243 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim68Q8K243 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim68Q8K243 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim68Q8K243 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Trim68Q8K243 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim68Q8K243 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.09■□□□□ 0.81
Trim68Q8K243 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim68Q8K243 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trim68Q8K243 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim68Q8K243 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim68Q8K243 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.09■□□□□ 0.81
Trim68Q8K243 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim68Q8K243 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim68Q8K243 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim68Q8K243 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim68Q8K243 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim68Q8K243 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim68Q8K243 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Trim68Q8K243 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim68Q8K243 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Trim68Q8K243 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim68Q8K243 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim68Q8K243 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Trim68Q8K243 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim68Q8K243 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim68Q8K243 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim68Q8K243 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim68Q8K243 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim68Q8K243 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trim68Q8K243 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim68Q8K243 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.07■□□□□ 0.8
Trim68Q8K243 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim68Q8K243 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim68Q8K243 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim68Q8K243 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim68Q8K243 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.06■□□□□ 0.8
Trim68Q8K243 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim68Q8K243 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim68Q8K243 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim68Q8K243 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim68Q8K243 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim68Q8K243 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim68Q8K243 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Trim68Q8K243 Gm6576-201ENSMUST00000169678 883 ntBASIC20.06■□□□□ 0.8
Trim68Q8K243 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.06■□□□□ 0.8
Trim68Q8K243 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.06■□□□□ 0.8
Trim68Q8K243 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Trim68Q8K243 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim68Q8K243 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim68Q8K243 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.06■□□□□ 0.8
Trim68Q8K243 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim68Q8K243 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim68Q8K243 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim68Q8K243 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim68Q8K243 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim68Q8K243 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim68Q8K243 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim68Q8K243 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim68Q8K243 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim68Q8K243 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim68Q8K243 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim68Q8K243 Gm5643-201ENSMUST00000117081 966 ntBASIC20.05■□□□□ 0.8
Trim68Q8K243 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.05■□□□□ 0.8
Trim68Q8K243 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Trim68Q8K243 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim68Q8K243 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Trim68Q8K243 AA386476-201ENSMUST00000098781 1665 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms