Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Pcdhb7Q8CDY9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Rarb-207ENSMUST00000225921 2756 ntBASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Gm7860-201ENSMUST00000121190 879 ntBASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb7Q8CDY9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb7Q8CDY9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb7Q8CDY9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 Gm9988-201ENSMUST00000069786 435 ntBASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb7Q8CDY9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb7Q8CDY9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pcdhb7Q8CDY9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb7Q8CDY9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdhb7Q8CDY9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdhb7Q8CDY9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb7Q8CDY9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb7Q8CDY9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb7Q8CDY9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb7Q8CDY9 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.58■□□□□ 0.57
Pcdhb7Q8CDY9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Pcdhb7Q8CDY9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Pcdhb7Q8CDY9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb7Q8CDY9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb7Q8CDY9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb7Q8CDY9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb7Q8CDY9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms