Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lysmd4Q8CC84 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lysmd4Q8CC84 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Spcs1-204ENSMUST00000226782 949 ntBASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lysmd4Q8CC84 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.64■□□□□ 0.26
Lysmd4Q8CC84 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lysmd4Q8CC84 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd4Q8CC84 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd4Q8CC84 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd4Q8CC84 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lysmd4Q8CC84 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd4Q8CC84 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd4Q8CC84 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd4Q8CC84 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lysmd4Q8CC84 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Lysmd4Q8CC84 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lysmd4Q8CC84 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms