Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Rarb-207ENSMUST00000225921 2756 ntBASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Mir7075-201ENSMUST00000184187 82 ntBASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rfx6Q8C7R7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rfx6Q8C7R7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Gm21956-201ENSMUST00000179946 522 ntBASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Gm13241-201ENSMUST00000094493 780 ntBASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rfx6Q8C7R7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rfx6Q8C7R7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.87■□□□□ 0.61
Rfx6Q8C7R7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx6Q8C7R7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rfx6Q8C7R7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx6Q8C7R7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rfx6Q8C7R7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx6Q8C7R7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx6Q8C7R7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rfx6Q8C7R7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Gm27801-201ENSMUST00000184174 223 ntBASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rfx6Q8C7R7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rfx6Q8C7R7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rfx6Q8C7R7 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms