Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Aph1bQ8C7N7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Aph1bQ8C7N7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Aph1bQ8C7N7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.46■□□□□ 0.54
Aph1bQ8C7N7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Aph1bQ8C7N7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Aph1bQ8C7N7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.43■□□□□ 0.54
Aph1bQ8C7N7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Aph1bQ8C7N7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Aph1bQ8C7N7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aph1bQ8C7N7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aph1bQ8C7N7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aph1bQ8C7N7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aph1bQ8C7N7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.4■□□□□ 0.54
Aph1bQ8C7N7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aph1bQ8C7N7 Gm43060-201ENSMUST00000200621 289 ntBASIC18.4■□□□□ 0.54
Aph1bQ8C7N7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Aph1bQ8C7N7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.4■□□□□ 0.54
Aph1bQ8C7N7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.4■□□□□ 0.54
Aph1bQ8C7N7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms