Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.6■□□□□ 0.57
Pabpc5Q8C7D3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pabpc5Q8C7D3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pabpc5Q8C7D3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pabpc5Q8C7D3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pabpc5Q8C7D3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pabpc5Q8C7D3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pabpc5Q8C7D3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pabpc5Q8C7D3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pabpc5Q8C7D3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pabpc5Q8C7D3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pabpc5Q8C7D3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pabpc5Q8C7D3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pabpc5Q8C7D3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pabpc5Q8C7D3 Gm4968-201ENSMUST00000071458 858 ntBASIC18.59■□□□□ 0.57
Pabpc5Q8C7D3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pabpc5Q8C7D3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pabpc5Q8C7D3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pabpc5Q8C7D3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pabpc5Q8C7D3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pabpc5Q8C7D3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Gm6420-201ENSMUST00000193885 723 ntBASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pabpc5Q8C7D3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pabpc5Q8C7D3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pabpc5Q8C7D3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pabpc5Q8C7D3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pabpc5Q8C7D3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pabpc5Q8C7D3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pabpc5Q8C7D3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pabpc5Q8C7D3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Pabpc5Q8C7D3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pabpc5Q8C7D3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pabpc5Q8C7D3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpc5Q8C7D3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpc5Q8C7D3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pabpc5Q8C7D3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.53■□□□□ 0.56
Pabpc5Q8C7D3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms