Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 BC021767-201ENSMUST00000126387 1716 ntBASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Gm5408-201ENSMUST00000197998 747 ntBASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Brat1Q8C3R1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brat1Q8C3R1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Brat1Q8C3R1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Brat1Q8C3R1 Gm26524-201ENSMUST00000192339 390 ntBASIC19.58■□□□□ 0.72
Brat1Q8C3R1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brat1Q8C3R1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brat1Q8C3R1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brat1Q8C3R1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brat1Q8C3R1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.58■□□□□ 0.72
Brat1Q8C3R1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Brat1Q8C3R1 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Brat1Q8C3R1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Gm4968-201ENSMUST00000071458 858 ntBASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Brat1Q8C3R1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.55■□□□□ 0.72
Brat1Q8C3R1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Brat1Q8C3R1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Brat1Q8C3R1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms