Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ska3Q8C263 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ska3Q8C263 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ska3Q8C263 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ska3Q8C263 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ska3Q8C263 Gm6420-201ENSMUST00000193885 723 ntBASIC17.45■□□□□ 0.38
Ska3Q8C263 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ska3Q8C263 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.44■□□□□ 0.38
Ska3Q8C263 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska3Q8C263 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ska3Q8C263 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ska3Q8C263 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.44■□□□□ 0.38
Ska3Q8C263 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ska3Q8C263 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska3Q8C263 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska3Q8C263 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska3Q8C263 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska3Q8C263 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ska3Q8C263 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ska3Q8C263 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska3Q8C263 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ska3Q8C263 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.43■□□□□ 0.38
Ska3Q8C263 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Ska3Q8C263 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ska3Q8C263 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.43■□□□□ 0.38
Ska3Q8C263 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ska3Q8C263 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Ska3Q8C263 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.42■□□□□ 0.38
Ska3Q8C263 Nespas-201ENSMUST00000143738 1083 ntBASIC17.42■□□□□ 0.38
Ska3Q8C263 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ska3Q8C263 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.42■□□□□ 0.38
Ska3Q8C263 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.42■□□□□ 0.38
Ska3Q8C263 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ska3Q8C263 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ska3Q8C263 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ska3Q8C263 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.42■□□□□ 0.38
Ska3Q8C263 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ska3Q8C263 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.42■□□□□ 0.38
Ska3Q8C263 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ska3Q8C263 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska3Q8C263 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska3Q8C263 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ska3Q8C263 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.41■□□□□ 0.38
Ska3Q8C263 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.41■□□□□ 0.38
Ska3Q8C263 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.41■□□□□ 0.38
Ska3Q8C263 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska3Q8C263 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska3Q8C263 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ska3Q8C263 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ska3Q8C263 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska3Q8C263 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska3Q8C263 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska3Q8C263 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska3Q8C263 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.4■□□□□ 0.38
Ska3Q8C263 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska3Q8C263 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.4■□□□□ 0.38
Ska3Q8C263 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.4■□□□□ 0.38
Ska3Q8C263 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.4■□□□□ 0.38
Ska3Q8C263 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Ska3Q8C263 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ska3Q8C263 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska3Q8C263 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska3Q8C263 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ska3Q8C263 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ska3Q8C263 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ska3Q8C263 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ska3Q8C263 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ska3Q8C263 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ska3Q8C263 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms