Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Gm10849-201ENSMUST00000100397 618 ntBASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trerf1Q8BXJ2 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Gm26571-201ENSMUST00000181399 666 ntBASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trerf1Q8BXJ2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trerf1Q8BXJ2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trerf1Q8BXJ2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trerf1Q8BXJ2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trerf1Q8BXJ2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trerf1Q8BXJ2 Gm10033-202ENSMUST00000211874 928 ntBASIC19.45■□□□□ 0.7
Trerf1Q8BXJ2 Gm18671-201ENSMUST00000214826 683 ntBASIC19.45■□□□□ 0.7
Trerf1Q8BXJ2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trerf1Q8BXJ2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trerf1Q8BXJ2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trerf1Q8BXJ2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Reep4-203ENSMUST00000226563 1444 ntBASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Gm42778-201ENSMUST00000199644 553 ntBASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Gm42569-201ENSMUST00000200539 472 ntBASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Trerf1Q8BXJ2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trerf1Q8BXJ2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trerf1Q8BXJ2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trerf1Q8BXJ2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.43■□□□□ 0.7
Trerf1Q8BXJ2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trerf1Q8BXJ2 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.43■□□□□ 0.7
Trerf1Q8BXJ2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
Trerf1Q8BXJ2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trerf1Q8BXJ2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trerf1Q8BXJ2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trerf1Q8BXJ2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Gm38205-201ENSMUST00000192243 258 ntBASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trerf1Q8BXJ2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trerf1Q8BXJ2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms