Protein–RNA interactions for Protein: Q8BW22

Ss18l1, Calcium-responsive transactivator, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18l1Q8BW22 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Gm11643-201ENSMUST00000119578 864 ntBASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Mir5122-201ENSMUST00000175004 89 ntBASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ss18l1Q8BW22 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Gm9987-201ENSMUST00000069768 567 ntBASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ss18l1Q8BW22 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Flg-201ENSMUST00000050758 1488 ntBASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Ss18l1Q8BW22 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Ss18l1Q8BW22 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ss18l1Q8BW22 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ss18l1Q8BW22 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ss18l1Q8BW22 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ss18l1Q8BW22 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ss18l1Q8BW22 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ss18l1Q8BW22 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ss18l1Q8BW22 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ss18l1Q8BW22 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ss18l1Q8BW22 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ss18l1Q8BW22 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ss18l1Q8BW22 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.5■□□□□ 0.23
Ss18l1Q8BW22 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.5■□□□□ 0.23
Ss18l1Q8BW22 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.5■□□□□ 0.23
Ss18l1Q8BW22 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ss18l1Q8BW22 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms