Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdk5rap1Q8BTW8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cdk5rap1Q8BTW8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cdk5rap1Q8BTW8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Cdk5rap1Q8BTW8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk5rap1Q8BTW8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.64■□□□□ 0.41
Cdk5rap1Q8BTW8 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.64■□□□□ 0.41
Cdk5rap1Q8BTW8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk5rap1Q8BTW8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk5rap1Q8BTW8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk5rap1Q8BTW8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdk5rap1Q8BTW8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cdk5rap1Q8BTW8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap1Q8BTW8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap1Q8BTW8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap1Q8BTW8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap1Q8BTW8 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.63■□□□□ 0.41
Cdk5rap1Q8BTW8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap1Q8BTW8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdk5rap1Q8BTW8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdk5rap1Q8BTW8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Gm8520-201ENSMUST00000186517 868 ntBASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Gm37856-201ENSMUST00000191634 999 ntBASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdk5rap1Q8BTW8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Cdk5rap1Q8BTW8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap1Q8BTW8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap1Q8BTW8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cdk5rap1Q8BTW8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap1Q8BTW8 Trmt13-210ENSMUST00000198454 880 ntBASIC17.61■□□□□ 0.41
Cdk5rap1Q8BTW8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap1Q8BTW8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap1Q8BTW8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap1Q8BTW8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdk5rap1Q8BTW8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap1Q8BTW8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap1Q8BTW8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap1Q8BTW8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap1Q8BTW8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.6■□□□□ 0.41
Cdk5rap1Q8BTW8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdk5rap1Q8BTW8 Gm2559-201ENSMUST00000201323 363 ntBASIC17.6■□□□□ 0.41
Cdk5rap1Q8BTW8 Gm44549-201ENSMUST00000208351 577 ntBASIC17.6■□□□□ 0.41
Cdk5rap1Q8BTW8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap1Q8BTW8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdk5rap1Q8BTW8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdk5rap1Q8BTW8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk5rap1Q8BTW8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdk5rap1Q8BTW8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms