Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smco3Q8BQM7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smco3Q8BQM7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Gm9870-201ENSMUST00000063874 645 ntBASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Gm5921-201ENSMUST00000075898 882 ntBASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smco3Q8BQM7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Smco3Q8BQM7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.05
Smco3Q8BQM7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smco3Q8BQM7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smco3Q8BQM7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smco3Q8BQM7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smco3Q8BQM7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smco3Q8BQM7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smco3Q8BQM7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms