Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Col16a1Q8BLX7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col16a1Q8BLX7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col16a1Q8BLX7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Col16a1Q8BLX7 Gm16042-201ENSMUST00000204813 1247 ntBASIC24.73■■□□□ 1.55
Col16a1Q8BLX7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC24.73■■□□□ 1.55
Col16a1Q8BLX7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC24.73■■□□□ 1.55
Col16a1Q8BLX7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Col16a1Q8BLX7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Col16a1Q8BLX7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Col16a1Q8BLX7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC24.72■■□□□ 1.55
Col16a1Q8BLX7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC24.72■■□□□ 1.55
Col16a1Q8BLX7 AC124603.1-201ENSMUST00000223843 308 ntBASIC24.72■■□□□ 1.55
Col16a1Q8BLX7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Col16a1Q8BLX7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col16a1Q8BLX7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC24.72■■□□□ 1.55
Col16a1Q8BLX7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Col16a1Q8BLX7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Col16a1Q8BLX7 Arhgef4-208ENSMUST00000211073 171 ntBASIC24.71■■□□□ 1.55
Col16a1Q8BLX7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col16a1Q8BLX7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Col16a1Q8BLX7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col16a1Q8BLX7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col16a1Q8BLX7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col16a1Q8BLX7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC24.71■■□□□ 1.55
Col16a1Q8BLX7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Col16a1Q8BLX7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col16a1Q8BLX7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Col16a1Q8BLX7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Col16a1Q8BLX7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Col16a1Q8BLX7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Col16a1Q8BLX7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Col16a1Q8BLX7 Gm13559-201ENSMUST00000120476 863 ntBASIC24.7■■□□□ 1.54
Col16a1Q8BLX7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC24.7■■□□□ 1.54
Col16a1Q8BLX7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
Col16a1Q8BLX7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col16a1Q8BLX7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC24.7■■□□□ 1.54
Col16a1Q8BLX7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Col16a1Q8BLX7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Col16a1Q8BLX7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Col16a1Q8BLX7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col16a1Q8BLX7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Col16a1Q8BLX7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col16a1Q8BLX7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col16a1Q8BLX7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col16a1Q8BLX7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col16a1Q8BLX7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col16a1Q8BLX7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Gm10459-201ENSMUST00000202708 1155 ntBASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Gm30025-201ENSMUST00000218555 728 ntBASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Zfp783-201ENSMUST00000095946 670 ntBASIC24.67■■□□□ 1.54
Col16a1Q8BLX7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Gm11539-201ENSMUST00000119837 557 ntBASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Gm13436-201ENSMUST00000120418 567 ntBASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Gm43183-201ENSMUST00000200632 547 ntBASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Mtag2-201ENSMUST00000058665 714 ntBASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col16a1Q8BLX7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col16a1Q8BLX7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col16a1Q8BLX7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col16a1Q8BLX7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col16a1Q8BLX7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Col16a1Q8BLX7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Col16a1Q8BLX7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
Col16a1Q8BLX7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Col16a1Q8BLX7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC24.64■■□□□ 1.54
Col16a1Q8BLX7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Col16a1Q8BLX7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
Col16a1Q8BLX7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
Col16a1Q8BLX7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Col16a1Q8BLX7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
Col16a1Q8BLX7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Col16a1Q8BLX7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Col16a1Q8BLX7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Col16a1Q8BLX7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 Gm7889-201ENSMUST00000185591 958 ntBASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 Gm3375-201ENSMUST00000203929 796 ntBASIC24.63■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms