Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.73■□□□□ 0.75
Usp1Q8BJQ2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Usp1Q8BJQ2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp1Q8BJQ2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp1Q8BJQ2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Usp1Q8BJQ2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp1Q8BJQ2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Usp1Q8BJQ2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp1Q8BJQ2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Usp1Q8BJQ2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp1Q8BJQ2 Gm44549-201ENSMUST00000208351 577 ntBASIC19.72■□□□□ 0.75
Usp1Q8BJQ2 Dio3-201ENSMUST00000097228 1449 ntBASIC19.72■□□□□ 0.75
Usp1Q8BJQ2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.72■□□□□ 0.75
Usp1Q8BJQ2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usp1Q8BJQ2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Gm5643-201ENSMUST00000117081 966 ntBASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usp1Q8BJQ2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp1Q8BJQ2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.7■□□□□ 0.74
Usp1Q8BJQ2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Usp1Q8BJQ2 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.7■□□□□ 0.74
Usp1Q8BJQ2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp1Q8BJQ2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp1Q8BJQ2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp1Q8BJQ2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usp1Q8BJQ2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Usp1Q8BJQ2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Usp1Q8BJQ2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp1Q8BJQ2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp1Q8BJQ2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp1Q8BJQ2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp1Q8BJQ2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp1Q8BJQ2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp1Q8BJQ2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp1Q8BJQ2 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.68■□□□□ 0.74
Usp1Q8BJQ2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp1Q8BJQ2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp1Q8BJQ2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.67■□□□□ 0.74
Usp1Q8BJQ2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Gm18666-201ENSMUST00000190039 958 ntBASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp1Q8BJQ2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp1Q8BJQ2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Usp1Q8BJQ2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp1Q8BJQ2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp1Q8BJQ2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp1Q8BJQ2 Mir7071-201ENSMUST00000184847 69 ntBASIC19.65■□□□□ 0.74
Usp1Q8BJQ2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.65■□□□□ 0.74
Usp1Q8BJQ2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp1Q8BJQ2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp1Q8BJQ2 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms