Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scn3bQ8BHK2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Scn3bQ8BHK2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Scn3bQ8BHK2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Scn3bQ8BHK2 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Scn3bQ8BHK2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.27■□□□□ 0.36
Scn3bQ8BHK2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn3bQ8BHK2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn3bQ8BHK2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Scn3bQ8BHK2 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.27■□□□□ 0.36
Scn3bQ8BHK2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Scn3bQ8BHK2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn3bQ8BHK2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn3bQ8BHK2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn3bQ8BHK2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn3bQ8BHK2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn3bQ8BHK2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn3bQ8BHK2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn3bQ8BHK2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn3bQ8BHK2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn3bQ8BHK2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Scn3bQ8BHK2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Scn3bQ8BHK2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms