Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
U2af1l4Q8BGJ9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1l4Q8BGJ9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1l4Q8BGJ9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.92■■□□□ 1.1
U2af1l4Q8BGJ9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1l4Q8BGJ9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
U2af1l4Q8BGJ9 BC021767-201ENSMUST00000126387 1716 ntBASIC21.92■■□□□ 1.1
U2af1l4Q8BGJ9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
U2af1l4Q8BGJ9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Gm7290-201ENSMUST00000104990 617 ntBASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Gm12918-201ENSMUST00000120234 636 ntBASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Gm15710-201ENSMUST00000121821 636 ntBASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Gm5075-201ENSMUST00000196916 622 ntBASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
U2af1l4Q8BGJ9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
U2af1l4Q8BGJ9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
U2af1l4Q8BGJ9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
U2af1l4Q8BGJ9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
U2af1l4Q8BGJ9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
U2af1l4Q8BGJ9 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.89■■□□□ 1.09
U2af1l4Q8BGJ9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
U2af1l4Q8BGJ9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
U2af1l4Q8BGJ9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.89■■□□□ 1.09
U2af1l4Q8BGJ9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
U2af1l4Q8BGJ9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
U2af1l4Q8BGJ9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
U2af1l4Q8BGJ9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Gm38205-201ENSMUST00000192243 258 ntBASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
U2af1l4Q8BGJ9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
U2af1l4Q8BGJ9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Gm6365-201ENSMUST00000054711 744 ntBASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
U2af1l4Q8BGJ9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
U2af1l4Q8BGJ9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1l4Q8BGJ9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
U2af1l4Q8BGJ9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms