Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubp1Q811S7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubp1Q811S7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubp1Q811S7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ubp1Q811S7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ubp1Q811S7 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.3■□□□□ 0.52
Ubp1Q811S7 Golph3-205ENSMUST00000228671 2842 ntBASIC18.3■□□□□ 0.52
Ubp1Q811S7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ubp1Q811S7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.3■□□□□ 0.52
Ubp1Q811S7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubp1Q811S7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubp1Q811S7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubp1Q811S7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.3■□□□□ 0.52
Ubp1Q811S7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubp1Q811S7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ubp1Q811S7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Gm37179-201ENSMUST00000194862 823 ntBASIC18.29■□□□□ 0.52
Ubp1Q811S7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ubp1Q811S7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubp1Q811S7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ubp1Q811S7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ubp1Q811S7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ubp1Q811S7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ubp1Q811S7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.27■□□□□ 0.52
Ubp1Q811S7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Ubp1Q811S7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.27■□□□□ 0.52
Ubp1Q811S7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.27■□□□□ 0.52
Ubp1Q811S7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ubp1Q811S7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.27■□□□□ 0.51
Ubp1Q811S7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ubp1Q811S7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.26■□□□□ 0.51
Ubp1Q811S7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.25■□□□□ 0.51
Ubp1Q811S7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ubp1Q811S7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubp1Q811S7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.24■□□□□ 0.51
Ubp1Q811S7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ubp1Q811S7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ubp1Q811S7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ubp1Q811S7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms