Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim36Q80WG7 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.93■□□□□ 0.46
Trim36Q80WG7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Trim36Q80WG7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim36Q80WG7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim36Q80WG7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim36Q80WG7 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.93■□□□□ 0.46
Trim36Q80WG7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim36Q80WG7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim36Q80WG7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim36Q80WG7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim36Q80WG7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim36Q80WG7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trim36Q80WG7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Gm10493-201ENSMUST00000097270 612 ntBASIC17.92■□□□□ 0.46
Trim36Q80WG7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim36Q80WG7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim36Q80WG7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.9■□□□□ 0.46
Trim36Q80WG7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim36Q80WG7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim36Q80WG7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim36Q80WG7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim36Q80WG7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim36Q80WG7 Gm26571-201ENSMUST00000181399 666 ntBASIC17.89■□□□□ 0.45
Trim36Q80WG7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim36Q80WG7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.89■□□□□ 0.45
Trim36Q80WG7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim36Q80WG7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Trim36Q80WG7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim36Q80WG7 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.88■□□□□ 0.45
Trim36Q80WG7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim36Q80WG7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim36Q80WG7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms