Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdh19Q80TF3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
Pcdh19Q80TF3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdh19Q80TF3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Pcdh19Q80TF3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdh19Q80TF3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Gm20049-201ENSMUST00000219950 730 ntBASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdh19Q80TF3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh19Q80TF3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Gm12527-201ENSMUST00000117967 564 ntBASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh19Q80TF3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh19Q80TF3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms