Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.35■□□□□ 0.85
Ush1gQ80T11 Gm7977-201ENSMUST00000193787 748 ntBASIC20.35■□□□□ 0.85
Ush1gQ80T11 Gm2559-201ENSMUST00000201323 363 ntBASIC20.35■□□□□ 0.85
Ush1gQ80T11 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ush1gQ80T11 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Ush1gQ80T11 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ush1gQ80T11 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ush1gQ80T11 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ush1gQ80T11 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.35■□□□□ 0.85
Ush1gQ80T11 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ush1gQ80T11 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ush1gQ80T11 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ush1gQ80T11 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ush1gQ80T11 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.34■□□□□ 0.85
Ush1gQ80T11 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ush1gQ80T11 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ush1gQ80T11 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.34■□□□□ 0.85
Ush1gQ80T11 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ush1gQ80T11 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ush1gQ80T11 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Ush1gQ80T11 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1gQ80T11 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1gQ80T11 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1gQ80T11 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1gQ80T11 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1gQ80T11 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1gQ80T11 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ush1gQ80T11 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ush1gQ80T11 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1gQ80T11 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ush1gQ80T11 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ush1gQ80T11 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ush1gQ80T11 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ush1gQ80T11 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ush1gQ80T11 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Gm5643-201ENSMUST00000117081 966 ntBASIC20.32■□□□□ 0.84
Ush1gQ80T11 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ush1gQ80T11 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1gQ80T11 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1gQ80T11 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1gQ80T11 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1gQ80T11 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ush1gQ80T11 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.31■□□□□ 0.84
Ush1gQ80T11 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.31■□□□□ 0.84
Ush1gQ80T11 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1gQ80T11 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ush1gQ80T11 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Ush1gQ80T11 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1gQ80T11 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ush1gQ80T11 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1gQ80T11 Gm13836-201ENSMUST00000121159 501 ntBASIC20.3■□□□□ 0.84
Ush1gQ80T11 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.3■□□□□ 0.84
Ush1gQ80T11 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1gQ80T11 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1gQ80T11 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1gQ80T11 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1gQ80T11 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ush1gQ80T11 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ush1gQ80T11 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.28■□□□□ 0.84
Ush1gQ80T11 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ush1gQ80T11 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ush1gQ80T11 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms