Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Prpf38bQ80SY5 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.37■□□□□ 0.69
Prpf38bQ80SY5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38bQ80SY5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf38bQ80SY5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf38bQ80SY5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf38bQ80SY5 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf38bQ80SY5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38bQ80SY5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38bQ80SY5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38bQ80SY5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38bQ80SY5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38bQ80SY5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Prpf38bQ80SY5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Prpf38bQ80SY5 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38bQ80SY5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Prpf38bQ80SY5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38bQ80SY5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38bQ80SY5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38bQ80SY5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38bQ80SY5 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf38bQ80SY5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Prpf38bQ80SY5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Gm13534-201ENSMUST00000121169 513 ntBASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf38bQ80SY5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Gm27275-201ENSMUST00000184318 272 ntBASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf38bQ80SY5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms